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Results for "Length"

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• • Shruti Paniwala@shruti

  

  Fasta sequence length: awk '/^>/ {if (seqlen){print seqlen}; print ;seqlen=0;next; } { seqlen += length($0)}END{print seqlen}' file.fa #Length #Linux #OneLiner

  Tags: Length, Linux, OneLiner

  2666 days ago

• • Aaryan Lokwani@aaryan

  

  Count the contigs length in index fasta file with samtools. $ awk '{s+=$2}END{print s}' scaffolds.fasta.fai #Fasta #Index #Length #Count #Size #Samtools

  Tags: Fasta, Index, Length, Count, Size, Samtools

  2152 days ago

• • Rahul Nayak@rahul

  

  Fold the FASTA sequences with length $ fold -w 100 genome.fa #Fasta #Genome #Fold #Break #Length

  Tags: Fasta, Genome, Fold, Break, Length

  842 days ago