Results for "Library"
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mrFAST: Micro Read Fast Alignment Search Tool
...r defined error threshold, including indels up to 4+4 bp. This manual, describes how to choose the parameters and tune mrFAST with respect to the library settings. mrFAST is designed...2924 days ago
Hagfish - assess an assembly through creative use of coverage plots
...uires a reference sequence and a paired end re-sequencing data set. Hagfish has more power the larger the insert size of the paired end library is. Quick links: Instal...2900 days ago
- ...WiseScaffolder includes 4 subcommands: dumpconfig generates a configuration file that notably specifies the average insert size of the mate-pair library preprocess allows the detecti...
2846 days ago
- ...t can be run even on the laptop for small-to-medium size genomes flexible toward many sequencing technologies (Illumina, 454 or Sanger) and library types (paired-end, mate pairs...
2796 days ago
OPERA : Optimal Paired-End Read Assembler
...sic algorithm (to reduce local errors, improve efficiency etc.) and incorporated features that are important for scaffolding large genomes (multi-library support, better repeat-handli...2788 days ago
- Topics Displaying and describing data Modeling distributions of data Describing relationships in quantitative data Designing studies Probability Random variable...
2728 days ago
- GoJS is a feature-rich JavaScript library for implementing custom interactive diagrams and complex visualizations across modern web browsers and platforms. GoJS makes constructing Jav...
2714 days ago
- ...at https://github.com/jts/sga SGA dependencies: -google sparse hash library (http://code.google.com/p/google-sparsehash/) -the bamtools library (https://github.com/pezmaster...
2698 days ago
- ...ive of this activity is to help you understand how to run Velvet in general, how to accurately estimate the insert size of a paired-end library through the use of Bowti...
2697 days ago
- ...file(s) corresponding to the second read of the read pair; -i) (Comma separated list of) insert size(s) of the library(-ies); -s) (Comma separated list of) library(-ies) standard deviation(s) o...
2693 days ago
