Installing Perl environment on Linux
By using plenv, you can easily install and switch among different version of Perl. This will be installed under your home directory in~/.plenv. Install latest Perl (with supporting multithreading) and CPANMinus. $ cd $ git clone git://github.com/tokuhirom/plenv.git ~/.plenv $ git clon...Tags: Install, Perl, environment, Linux, plenv, CPAN, CPANMinus
2315 days ago
Linux Commands Cheat Sheet for Bioinformatics and Computational Biology Professionals
The purpose of this cheat sheet is to introduce biologist and bioinformatician to the frequently used tools for NGS analysis as well as giving experience in writing one-liners. File System ls — list items in current directory ls -l — list items in current directory and sh...Tags: Linux, Commands, Cheat, Sheet, Bioinformatics, Computational, Biology, Professionals
2274 days ago
Creating conda environment for python2.7
TIP: By default, environments are installed into the envs directory in your conda directory. Run conda create --help for information on specifying a different path. Use the Terminal or an Anaconda Prompt for the following steps. To create an environment: c...Tags: Creat, conda, environment, python2.7, python, Linux
2184 days ago
Installing Bandage on Ubunty !
The following instructions successfully build Bandage (https://github.com/rrwick/Bandage ) on a fresh installation of Ubuntu 14.04: Ensure the package lists are up-to-date: sudo apt-get update Install prerequisite packages: sudo apt-get install build-essential git qtbase5-dev libqt5...Tags: Install, Bandage, Ubuntu, Linux, Make, Tools, Genome, Assembly
2183 days ago