Results for "Linux Server"
Bookmarks
TAndem REpeat ANalyzer -TAREAN – is a computational p...from bitbucket repository. Use public Galaxy-based server at https://repeatexplorer-elixir.cerit-sc.cz/. The server is provided in frame of the&n...2180 days ago
- BLASR (Basic Local Alignment with Successive Refinement) for mapping Single Molecule...y documented, but I can explain that to you. I use a 24 cores / 48G ram server for the alignment. It took ab...
2172 days ago
CGView - Circular Genome Viewer
CGView is a Java package for generating high quality, zoomable maps o...ndex.html https://www.gview.ca/wiki/GView/WebHome https://server.gview.ca/ http://stothard.afns.ualberta.ca/cgview_server/ Paper https://academic.ou...2144 days ago
JBrowse: Embeddable genome browser built completely with JavaScript and HTML5
JBrowse is a fast, embeddable genome browser built comple...iles on your computer without uploading them to any server. Supports GFF3, BED, FASTA,...installations with thousands of tracks. Very light server resource requirements. In fac...2135 days ago
NanoPack: visualizing and processing long-read sequencing data
The NanoPack tools are written in Python3 and released under the GNU GPL3.0 License. The source code c...e scripts and their documentation. The scripts are compatible with Linux, Mac OS and the MS Windows 10 subsystem for Linux...2093 days ago
FinisherSC:a repeat-aware tool for upgrading de novo assembly using long reads
Here is the command to run the tool: python finisherSC.py destinedFolder mummerPath If you are running on server computer and would like to us...2083 days ago
Mulan: Multiple-sequence local alignment and visualization for studying function and evolution
Mulan: Multiple-sequence local alignment and visualization for studying function and evolution Mulan (http://mulan.dcode.org/), a novel method and a network server for comparing multiple draft...2079 days ago
STELLAR: fast and exact local alignments
STELLAR is very practical and fast on very long sequences which makes it a suitable new tool for finding local alignments between genomic sequences under the edit distance model. Binaries are freely available for Linux, Windows, and Mac OS X at http://www.seqan.de/projects/stellar.2074 days ago
Heatmapper: web-enabled heat mapping for all
Heatmapper is a freely available web server that allows users to interactively visualize their data in the form of heat maps through an easy-to-use graphical interface. Heatmapper is a v...2041 days ago
nQuire: a statistical framework for ploidy estimation using next generation sequencing
nQuire provides a statistical framework to study organisms with intraspecific variation in ploidy. nQuire is likel...ples where intact nuclei are not preserved. It is implemented as a stand-alone Linux...2038 days ago
