List of bioinformatics open source projects/software.
Open source software is software that can be freely used, changed, and shared (in modified or unmodified form) by anyone. Open source software is made by many people,...3751 days ago
List of generic simulation software/tools/resource with brief description and homepage !!!
List of generic simulation software/tools/resource with b...ion http://acb.qfab.org/acb/evolsim/EvolveAGene A realistic coding sequence simulation.../simuGWAS A forward-time simulator that simulates realistic samples for genome-wide ass...3731 days ago
List of In-silico Binding Site Prediction Tools
Following are the list of In-silico Binding Site Prediction in Proteins...ecognition servers, requiring only a 3D model and list of templates as inputs. A sim...ns with small molecules. The output is a detailed list of the shared physico-chemica...3738 days ago
Next generation sequencing in R or bioconductor environment
...s three major data containers - GRanges, GRangesList and GappedAlignments - which...ed to the IRanges container, the GRanges/GRangesList classes are more flexible and...cation ] PICS The PICS package applies probabilistic inference to aligned-read C...3619 days ago
Commercial and public next-gen-seq (NGS) software
...srs/ See also this thread for ChIP-Seq, until I get time to update this list. Alternate Base Calling Role...iomedcentral.com/1471-2105/14/S7/S10 Reference Illumina has a software list: http://www.illumina.com/page...3513 days ago
List of Biotechnology Research Laboratory, University, and Centre in India
...RRL, JM - Regional Research Laboratory, Jammu RRL, TVM - Regional Research Laboratory, Thiruvananthapuram CITYWISE City Wise Llist of Govt. and Non Govt. Resear...2565 days ago
Rosalind Problem Solution with Perl
...Take a tour to get the hang of how Rosalind works. Bioinformatics Textbook Track Find more about Rosalind puzzle at http://rosalind.info/problems/list-view/?location=bioinformatics...3246 days ago
Software packages for next gen sequence analysis
...ntification from Short Sequence Reads. BED file input. Raja Jothi @ NIH. Perl. **See also this thread for ChIP-Seq, until I get time to update this list. Alternate Base Calling * Ro...3237 days ago
Comprehensive list of visualization tools for biological pathways
...mics data analysis and visualization. Following are the comprehensive list of visualization tools for bi...bsp; Visualization of over-represented pathways and reactions from gene lists http://www.reactome.org/sky...2281 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
...P-Seq, Genome Browser, etc (entire list on website); Main Workbench o...Indelocator is a high-sensitivity list of putative indel events cont...ASTQ, Reference sequence file and list file containing STR locations...Analysis, and Search Tool; probabilistic search tool for identifying...2903 days ago