Results for "Long non-coding RNAs"
Bio-Scripts
Perl script to check modules installed !
#use strict; use warnings; use ExtUtils::Installed; # # First, check if all the required m...istics::Multtest', 'File::Path', 'Statistics::Distributions', 'Getopt::Long...1158 days ago
- vik@vik-Lenovo-ideapad-320-15ISK:~/Downloads/setu/setu$ sudo apt in...libstdc++-7-dev libsys-hostname-long-perl libtcl8.6 libtinfo-dev l...libstdc++-7-dev libsys-hostname-long-perl libtcl8.6 libtinfo-dev l...ionic/main amd64 libsys-hostname-long-perl...selected package libsys-hostname-long...
1057 days ago
- #Long reads bedtools bamtofastq -i input.bam -fq output.fastq #For paired-end reads: samtools sort -n input.bam -o input_sorted.bam # sort reads by identifier-name (-n) bedtools bamtofastq -i input_sorted.bam -fq output_r1.fastq -fq2 output_r2.fastq
999 days ago
Python script to read FASTA and FASTQ file !
# !/usr/bin/env python3 # -*- coding: utf-8 -*- from pysam import FastxFile def read_fasta_q_file(fasta_q_file): """Parse FASTA/Q file using `pysam...979 days ago
Tadpole is 250x faster than SPADes assembler !
lege@jit-Lenovo-ideapad-320-15ISK:~/Downloads/MyTools/Vir$ tadpole.sh Written by Brian...ers. extend: Extend sequences to be longer, an.... discardlength=150 (sdl) Discard shavings up to this long...979 days ago
Perl script for chi-squared test !
#!/usr/bin/perl # # chidi.pl # # A script to perform a chi-squared test of the dinucleotide...ed by: $Author$ # Last updated on: $Date$ use strict; use warnings; use Getopt::Long...414 days ago
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