889 days ago
Short-read assembly using Spades !
If we only had Illumina reads, we could also assemble these using the tool Spades. You can try this here, or try it later on your own data. Get data We will use the s...822 days ago
580 days ago
Bioinformatics tools for genome assembly !
...le sequencing technologies, such as Illumina and PacBio. Canu: A long-read assembler optimized for PacBio and Oxford Nanopore sequencing data. Flye: A long-read assembler suitable for bacter...283 days ago
Mitochondrial genome assembly tools !
...r de novo assembly of organelle genomes, including mitochondria. It utilizes a seed-and-extend algorithm and is suitable for both short-read and long-read data. MITOS2: MITOS2 is an u...239 days ago