Results for "MV data analysis"
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Stacks is a software pipeline for building loci from short-read sequences, such as those generated on the Illumina platform. Stacks was developed to work with restriction enzyme-based data, su...2993 days ago
Ensembl comparative genomics resources
...comprehensive and reproducible analysis of chordate genome data. Ensembl computes pairwise an...informatics infrastructure and data presentation across all suppo...is extensively reused for the analysis of non-vertebrate species by...produce reference comparative data and make it freely available. Da...2989 days ago
- This software is designed to identify both simple and complex rearrangements from paired-end sequencing data. Us...
2988 days ago
- Machine Learning in Python Simple and efficient tools for data mining and data analysis Accessible to everybody, and reusable in various contexts Built on NumPy, SciPy, and matplotlib Open source, commercially usable - BSD license More at http://scikit-learn.org/stable/index.html
2988 days ago
- Ultrafast and accurate nucleotide-resolution analysis of structural variants More at http://bioinform.github.io/breakseq2/ Download BreakSeq2 Latest version: https://github.com/bioinform/b...
2988 days ago
- LAST can: Handle big sequence data, e.g: Compare two vertebrate genomes Align billions of DNA reads to a gen...e Indicate the reliability of each aligned column. Use sequence quality data pro...
2979 days ago
- GA4GH Data Working Group Led by David Haussler (UCSC) and Richard Durbin (Sanger Institute), the Data Working Group (DWG) of the Gl...acy respecting and interoperable sharing of Genomic data. M...
2967 days ago
RNA-Seq De novo Assembly Using Trinity
Trinity, developed at the Broad Institute and the Hebrew Univers...f transcriptomes from RNA-seq data. Trinity combines three indep...inity partitions the sequence data into many individual de Bruij...nchworm assembles the RNA-seq data into the unique sequences of...directory. Assemble RNA-Seq data lik...2965 days ago
- Picard is a set of command line tools for manipulating high-throughput sequencing (HTS) data and formats such as SAM/BAM/CRAM and VCF. These file formats are defined in the Hts-specs repository. See...
2928 days ago
