Comment on "Next Generation Sequencing (NGS) Tutorials"
Challenges and Solutions in the Analysis of Next Generation Sequence Data http://lh3lh3.users.sourceforge.net/download/sam-20100630.pdf3577 days ago
Comment on "Next generation sequencing in R or bioconductor environment"
R package SPP for chip-seq analysis. It can read quite a few aligner's output file. Here is the original p...matics-in-biomed/SRAdb: query and use public next-generation sequencing data from within Rhttp://www.biomed...3615 days ago
Comment on "R and Bioconductor Tutorial"
R and Bioconductor for NGS data analysis http://master.bioconductor.org/help/course-materials/2012/CSC2012/Bioconductor-tutorial.pdf http://manuals.bioinformatics.ucr.edu/home/ht-seq3638 days ago
Comment on "R and Bioconductor Tutorial"
...eading in complete genomes and BioC annotation data [3] DEGSeq – Identify differentially expressed genes from RNA-Seq data. [4] IRanges – infrast...u/kb/bioinformatics/sequencing-information/ngs-analysis-with-r/ http://bioconductor....3662 days ago
Comment on "R and Bioconductor Tutorial"
Next generation sequencing data analysis with R/Bioconductor http://www.bioconductor.org/help/course-materials/2012/CSC2012/Bioconductor-tutorial.pdf3662 days ago
Comment on "Next Generation Sequencing (NGS) Tutorials"
http://omictools.com/ an useful tools for omics data analysis ...3678 days ago
Comment on "R and Bioconductor Tutorial"
SimpleR tutorials is very lucid and practical for general data analysis with R. http://cran.r-project.org/doc/contrib/Verzani-SimpleR.pdf3699 days ago
Comment on "Latest paper on comparison of mapping tools"
...ogies has led to an exponential growth of sequence data. To tackle this ‘data deluge’, here Lawr...National Laboratory introduce the BioPig sequence analysis toolkit as one of the solutions that scale to data and computation. BioPig: a Hadoo...3801 days ago
Comment on "Next Generation Sequencing (NGS) Tutorials"
A survey of tools for variant analysis of next-generation genome sequencing data http://bib.oxfordjournals.org/content/early/2013/01/21/bib.bbs086.full3803 days ago
Comment on "PLOS Computational Biology: Translational Bioinformatics educational resources"
Practical Guidelines for the Comprehensive Analysis of ChIP-seq Data http://www.ploscompbiol.org/article/info%3Adoi%2F10.1371%2Fjournal.pcbi.10033263807 days ago