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CISA: Contig Integrator for Sequence Assembly
A plethora of algorithmic assemblers have been proposed for the de novo assembly of genomes, however, no individual...emented in Python and requires MUMmer and BLAST+ to be installed on the local machine....2696 days ago
Understanding Greedy Algorithms
Learning greedy algo for biologist. https://www.topcoder.com/community/data-sci...-tutorials/greedy-is-good/ This webpage is also useful for the same: http://learninglover.com/examples.php?id=59...2699 days ago
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FSA: Fast Statistical Alignment
...everal novel methods for constructing better alignments: FSA uses machine-learning techniques to estimate gap an...ers on the fly for each set of input sequences. This "query-specific learning" alignment method makes FSA v...2643 days ago
ChromHMM: Chromatin state discovery and characterization
ChromHMM is software for learning and characterizing chromatin states. ChromHMM can integrate multiple chromatin datasets such as ChIP-seq data of various histone modifications to d...2571 days ago
Artificial Intelligence Material !
Major Machine Learning Types Explianed in 11 Pages Credit: McKinsey For more applied resource you can see at: 1. Data Science Process https://lnkd.in/fMHtxYP 2. Data Visuali...1736 days ago
SuRankCo: supervised ranking of contigs in de novo assemblies
SuRankCo is a machine learning based software to score and rank contigs from de novo assemblies of next generation sequencing data. It trains with alignments of contigs with known...2536 days ago