Results for "Machine learning"
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Fermi is a de novo assembler with a particular focus on assembling Illumina short sequence reads from a mammal...a favorable solution.Fermi is designed to be used on a multi-core Linux machine...2798 days ago
- IMPUTE2 is a computer program for phasing observed genotypes and imputing missin...or indeed to phasing and imputation in general, we suggest that you start by learning the basics. You should begin...
2750 days ago
- The objective of this activity is to help you understand how to run Velvet ...oducing a de novo assembly from Illumina reads. http://evomics.org/learning/assembly-and-alignment/velvet...
2707 days ago
CISA: Contig Integrator for Sequence Assembly
A plethora of algorithmic assemblers have been proposed for the de novo assembly of genomes, however, no individual...emented in Python and requires MUMmer and BLAST+ to be installed on the local machine....2701 days ago
Understanding Greedy Algorithms
Learning greedy algo for biologist. https://www.topcoder.com/community/data-sci...-tutorials/greedy-is-good/ This webpage is also useful for the same: http://learninglover.com/examples.php?id=59...2704 days ago
- v0.0 by Glenn Hickey (hickey@soe.ucsc.edu) Progressive Cactus is a whole-genome alignment package. Requirements...wget 64bit processor and build environment 150GB+ of memory on at least one machine...
2668 days ago
FSA: Fast Statistical Alignment
...everal novel methods for constructing better alignments: FSA uses machine-learning techniques to estimate gap an...ers on the fly for each set of input sequences. This "query-specific learning" alignment method makes FSA v...2648 days ago
ChromHMM: Chromatin state discovery and characterization
ChromHMM is software for learning and characterizing chromatin states. ChromHMM can integrate multiple chromatin datasets such as ChIP-seq data of various histone modifications to d...2576 days ago
Artificial Intelligence Material !
Major Machine Learning Types Explianed in 11 Pages Credit: McKinsey For more applied resource you can see at: 1. Data Science Process https://lnkd.in/fMHtxYP 2. Data Visuali...1741 days ago
SuRankCo: supervised ranking of contigs in de novo assemblies
SuRankCo is a machine learning based software to score and rank contigs from de novo assemblies of next generation sequencing data. It trains with alignments of contigs with known...2541 days ago
