Results for "Mammalian reproduction"
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Resolving the complexity of the human genome using single-molecule sequencing
The human genome is arguably the most complete mammalian reference assembly yet more than 160 euchromatic gaps remain and aspects of its structural variation remain poorly underst...3218 days ago
Comparative genomics educational material and papers bookmarks
Alignment of the porcine genome against seven other mammalian genomes (Supplementary Information) identified homologous synteny blocks (HSBs). Using porcine HSBs and stringent filter...2731 days ago
CABOG: Celera Assembler with Best Overlap Graph
CABOG (Celera Assembler with Best Overlap Graph) is scientific software for DNA research. CABOG has been a crit...operates on small genomes such as bacterial as well as large genomes such as mammalian. C...2544 days ago
CAR: Reconstructing Contiguous Regions of an Ancestral Genome
We describe a new method for predicting the ancestral order and orientation of those in...painting experiments to produce a map of an early mammalian genome that accounts for 96.8...ns but disagrees with others. Although only a few mammalian ge...2541 days ago
Versatile genome assembly evaluation with QUAST-LG
QUAST-LG is an extension of QUAST intended for evaluating large-scale genome assemblies (up to mammalian-si...1958 days ago
Flye: Fast and accurate de novo assembler for single molecule sequencing reads
Flye is a de novo assembler for single molecule sequencing reads, such as those produced by PacBio and Oxford Nanopo...esigned for a wide range of datasets, from small bacterial projects to large mammalian-sc...1856 days ago
Flye: Fast and accurate de novo assembler for single molecule sequencing reads
Flye is a de novo assembler for single molecule sequencing reads, such as those produced by PacBio and Oxford Nanopo...esigned for a wide range of datasets, from small bacterial projects to large mammalian-sc...1762 days ago
- GeneMates is an R package implementing a network approach to identify horizontal gene...genes is usually confounded by bacterial population structure due to clonal reproduction. https://www.biorxiv.org/con...
1517 days ago
CSA: A high-throughput chromosome-scale assembly pipeline for vertebrate genomes
The pipeline can use information from scaffolded assemblies (for example from HiC or 10X Genomics), or even from div...on high-end Desktop computers (Intel i7, 12 CPU threads, 128 GB RAM). Larger mammalian ge...1149 days ago
