Results for "Map"

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  • Understanding PairedEnd(PE) mapping https://davetang.org/muse/2014/07/24/getting-started-paired-end-reads/ #PE #Paired #End #PairedEnd #Mapping #Map #Learn

    Tags: PE, Paired, End, PairedEnd, Mapping, Map, Learn

    2106 days ago

  • Cancer Dependency Map

    The consequences of alterations in the DNA of cancer cells and subsequent vulnerabilities are not fully understood. This project aims to assign a dependency to every cancer cell in a patient which could be exploited to develop new therapies. This knowledge is foundational for precision cancer med...

    Tags: Cancer, Dependency, Map

    1551 days ago

  • Mercator: Multiple Whole-Genome Orthology Map Construction

    Whole-genome homology maps attempt to identify the evolutionary relationships between and within multiple genomes. The term "syntenic" is often used to describe regions of multiple genomes that are believed to have evolved from the same region in an ancestral genome. However, it has been pointed ...

    Tags: Mercator, Multiple, Whole-Genome, Orthology, Map, Construction, orthologous, homologous, paralogous, Synteny, ancetral

    1454 days ago

  • JBrowse: Embeddable genome browser built completely with JavaScript and HTML5

    JBrowse is a fast, embeddable genome browser built completely with JavaScript and HTML5, with optional run-once data formatting tools written in Perl. Headline Features: Fast, smooth scrolling and zooming. Explore your genome with unparalleled speed. Scales easily to multi-gigabase genomes a...

    Tags: JBrowse, Embeddable, genome, browser, genome, reads, view, map, JavaScript, HTML5

    2144 days ago

  • Heatmapper: web-enabled heat mapping for all

    Heatmapper is a freely available web server that allows users to interactively visualize their data in the form of heat maps through an easy-to-use graphical interface. Heatmapper is a versatile tool that allows users to easily create a wide variety of heat maps for many different data types and ...

    Tags: Heatmapper, web-enabled, web, heat, map, mapping, all, online, tool

    2050 days ago

  • Sequence Tube Maps: displays multiple genomic sequences in the form of a tube map

    A JavaScript module for the visualization of genomic sequence graphs. It automatically generates a "tube map"-like visualization of sequence graphs which have been created with vg. (https://github.com/vgteam/vg) Link to working demo: https://vgteam.github.io/sequenceTubeMap/

    Tags: Sequence, Tube, Maps, displays, multiple, genomic, sequences, tube, map, graphmap

    1524 days ago

  • Collection of Graph Visualization tools !

    Standard approaches to genome inference and analysis relate sequences to a single linear reference genome. This is efficient but has a fundamental problem: Differences from this reference are hard to observe and describe in a coherent way. Variation and sequence are separated.   https://fu...

    Tags: graph, map, vg, plot

    474 days ago