Best book Titles for Learning Bionformatics
...ss Molecular Bioinformatics: Algorithms and Applications, Steffen Schulze-Kremer, 1995, Walter De Gruyter Introduction to Computational Biology - Maps, sequences and genomes, Micha...3923 days ago
Useful Publications and Websites for Deep Sequencing Data Analysis
...oS One 6(5):e19379, 2011. Full Text Development of high-density genetic maps for barley and wheat using a...al., PLoS One 6(4):e19315, 2011. Full Text Genome evolution and meiotic maps by massively parallel DNA seq...3785 days ago
List of In-silico Binding Site Prediction Tools
...utoDock suite developed by Arthur Olson’s group at The Scripps Research Insitute) or the SiteHound-web server can be used to produce Affinity maps or MIFs. A python script name...3750 days ago
Next generation sequencing in R or bioconductor environment
...lotting genomic information from Ensembl TileQC: Flow Cell Quality Visualization rtracklayer: R interface to genome browsers genoPlotR: Plotting maps of genes and genomes Genomin...3630 days ago
Apps for Busy Bioinformatics Researchers !!!
DNAApp: DNAApp: for iPhone/iPad This is an iOS app that allows for the opening and analysis of DNA sequencing files - ab1. It includes handy tools such as "Reverse C...3547 days ago
Comprehensive list of visualization tools for biological pathways
...tml GenMAPP Visualization of gene expression and other genomic data on maps representing biological pathw...-based tool for the visualization, analysis and customization of pathway maps http://pathways.embl.de/ Ke...2293 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
...interface, writting in C++ and Java Input: Output: HOMOG Description: Analyzes heterogeneity with respect to single marker loci or known maps of markers; Carries out homog...2914 days ago
Genome Assembly Tools and Software - PART1 !!
...t Assembly of Genome-wide Physical Maps The purpose of this Pyth...ncapsulate and abstractify optical maps and their most common manipul.... It assembles reads into unitigs, maps them to the reference genome...mbler – Assembly of Physical Maps Compartmentalized assemble...2691 days ago
List of visualization tools for network biology
...of biological pathways, gene regulation networks and protein interaction maps. http://www.ariadnegenomics....ardized diagrams (Systems Biology Graphical Notation Process Description maps) http://arcadiapathways.sour...2294 days ago
Understanding BLASTn output format 6 !
BLASTn output format 6 BLASTn maps DNA against DNA, for example gene sequences against a reference genomeblastn -query genes.ffn -subject genome.fna -outfmt 6 BLAS...2144 days ago