Results for "Membrane Protein"
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HybPiper was designed for targeted sequence capture, in which DNA sequencing libraries...of the sample for each target region, and a separate file with the translated protein sequence. HybPiper also incl...2748 days ago
- Motif based sequence analysis suits The MEME Suite a...l motifs in collections of unaligned nucleotide or protein sequences, and to perform a w...uite supports motif-based analysis of DNA, RNA and protein sequences. It provides motif...
2698 days ago
- BioDownloader is a program for downloading and/or updating files from ftp/http servers...settings for common bioinformatics file-synchronization needs, including the Protein Data Bank (PDB) and National...
2634 days ago
- Our basic strategy in building homology maps is to use exons that are orthologous in m...BLAT to do this all-vs-all comparison with alignments being performed in protein space. Construct a graph wit...
2654 days ago
FSA: Fast Statistical Alignment
FSA is a probabilistic multiple sequence alignment algorith...a "distance-based" approach to aligning homologous protein, RNA or DNA sequences. Much a...viously available only for small-scale analyses of proteins or RNAs to large-scale probl...2654 days ago
- DIAMOND is a sequence aligner for protein and translated DNA searches and functions as a drop-in replacement for the NCBI BLAST software tools. It is suitable for protein-protein search as well as DNA...
2574 days ago
NCBI Prokaryotic Genome Annotation Pipeline
NCBI Prokaryotic Genome Annotation Pipeline is designed to annotate bacterial and arch...ids). Genome annotation is a multi-level process that includes prediction of protein-coding genes, as well as othe...2555 days ago
eQuant : energy-based quality assessment of protein
Protein structures are of varying quality. Especially,&nbs...the usefulness and reliability of these particular protein structures.eQuant is a service for structure quality assessment of single proteins, which utilizes a coarse-gra...2515 days ago
CoreTracker, a codon reassignment tracker
CoreTracker detects evidences of codon reassignment from the protein repertoire of a set of genomes by successively applying different algorithms. It’s a filtering approach that explore all pos...2510 days ago
I-PV: Interactive Protein Sequence Visualization
I-PV is a interactive data visualization software designed for inspection of protein sequences and mutation information. It is mainly used for Genetics and Bioinformatics. So what exactly makes it standout? http://i-pv.org/ipv_rec2507 days ago
