Results for "Membrane Protein"
Top-level pages
List of In-silico Binding Site Prediction Tools
...co Binding Site Prediction in Proteins tools CASTp : http://sts.bio...tlas of Surface Topography of proteins (CASTp) provides an online re...nt, and it also computes transmembrane (TM) channels. MolAxis has a...er molecules. Additionally, a membrane of dummy atoms can be placed...3752 days ago
Commercial and public next-gen-seq (NGS) software
Integrated solutions CLCbio Genomics Workbenc...cluding Smith-Waterman-Gotoh) of DNA/protein against a reference. Authors...finding near exact matches in DNA or protein databases using a hash table...., indicating the location of a bound protein of interest. Original algorit...3527 days ago
Apps for Busy Bioinformatics Researchers !!!
DNAApp: DNAApp: for iPhone/iPad This is an iOS app that...the interactome browser, is a project that offers protein-protein physical/enzymatic interactio...tion such as Gene Ontology, mutant phenotype, and protein and genetic interaction data....3550 days ago
Software packages for next gen sequence analysis
Integrated solutions * CLCbio Genomics Workbe...cluding Smith-Waterman-Gotoh) of DNA/protein against a reference. Authors...finding near exact matches in DNA or protein databases using a hash table...., indicating the location of a bound protein of interest. Original algorit...3251 days ago
Binding Site Prediction in Protein !
The interaction between proteins and other molecules is fundament...rediction of interaction sites on protein surface and tools for predict...cation of pockets and cavities in proteins structure, and quantitation...sed technique for the analysis of protein pockets. PocketPicker availab...2210 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
Commercial tools Strand NGS offers many different too...ons can be annotated with predicted transcript and protein effects using third party too...ion; predicts impact of amino acid substitution on protein; Calculates Bayes posterior p...2917 days ago
Genome Assembly Tools and Software - PART1 !!
The genome assemblers generally take a file o...d for targeting assembly of specific protein-coding genes using a graph st...combining both de Bruijn graphs and protein HMMs. The inclusion of HMM in...mbled contigs to the query reference protein. GRASP achieves much higher s...2694 days ago
Phylogenetic & Molecular Genetics Terms and Definitions
analog -- A feature that appears similar in two taxa which have originated from two di...m a Messenger RNA template ( Messenger RNA contains the coded information for protein synthesis). character -- Her...2470 days ago
Tools for bacterial whole genome annotation
RAST – Web tool (upload contigs), uses the...a multi-level process that includes prediction of protein-coding genes, as well as othe...databases. It identifies repeats, aligns ESTs and proteins to a genome, produces ab-ini...2340 days ago
List of visualization tools for network biology
Network analysis is any structured technique used to...ualization/ NAViGaTOR Visualizing and analyzing protein-protein interaction networks http://...ica.edu.tw/Hubba NetworkBLAST Analysis of protein interaction networks across s...2296 days ago
