2186 days ago
Comment on "Virtual Bioinformatics Online Tutorial"
...ning Courses by the Babraham Institute the Bioinformatics group JCBioinformatics Bioinformatics Crash Course Next-Gen Sequence Analysis Workshop (2013) R and NGS tutorial Bioinformatics Resources...2370 days ago
Comment on "Which of the following programming language is best for a bioinformatics beginner?"
...very enrich library stores with which you can do anything. for NGS , python is highly recommende...ew good tools made recently in python. R is good for downstream analysis like doing statistical analysis, create fancy graphs(ggplot2)...3580 days ago
Comment on "Which of the following programming language is best for a bioinformatics beginner?"
Well, if you are doing NGS analysis, C and C++ is a good option. It is a lower le...But, due to the huge amount of data content in NGS, the efficiency of your code...omputation speed, and hardware requirement. For NGS computations I suggest you to u...3580 days ago
Comment on "R and Bioconductor Tutorial"
R and Bioconductor for NGS data analysis http://master.bioconductor.org/help/course-materials/2012/CSC2012/Bioconductor-tutorial.pdf http://manuals.bioinformatics.ucr.edu/home/ht-seq3695 days ago
Comment on "R and Bioconductor Tutorial"
NGS with R ShortRead – Quality assesment of th...ates, trimming, string pattern searches [1] Biostrings – Reading sequences in...arvard.edu/kb/bioinformatics/sequencing-information/ngs-analysis-with-r/ http://bioconductor....3719 days ago
Comment on "Five unique traits of effective computational biologist"
...Getting Started in Gene Expression Microarray Analysis. PLoS Comput Biol5(...sp;PLoS Comput Biol8(9): e1002632 [link] Giddings MC (2008) On the Process of B...F, Wong N, Zerbino D, Schneider MV. (2013) The NGS WikiBook: a dynamic collaborative...3879 days ago
Comment on "Next Generation Sequencing (NGS) Tutorials"
ANGUS is a site built around the 2010 course on Analyzing Next-Generation Sequencing Data. It contains a number of detailed tutorials on mapping, assembly, mRNAseq, ChIP-seq, and resequencing analysis. Enjoy! http://ged.msu.edu/angus/index.html3955 days ago
Comment on "R and Bioconductor Tutorial"
I found one R package SeqinR very handy in statistical computing of NGS data. SeqinR 2.0-1: a contributed package to the project for statistical computing devoted to biological sequences retrieval and analysis Link :http://seqinr.r-forge.r-project.org/seqinr_2_0-1.pdf3955 days ago
Comment on "Next Generation Sequencing (NGS) Tutorials"
My favourite tutorial page for NGS based data analysis http://www.csc.fi/english/csc/courses/archive/ngs_workshop3955 days ago