Results for "NIH"
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Next Generation Sequencing (NGS) Tutorials
...ead annotation pipeline: a cloud computing-based pipeline for high-throughput analysis of next-generation sequencing data. http://www.ncbi.nlm.nih.gov/pubmed/23657089 GATK: a...3481 days ago
- ...a genome 3D structure (b) from the sole knowledge of the contacts between different genomic regions (a) as determined by Hi-C (http://www.ncbi.nlm.nih.gov/pubmed/19815776). There...
3412 days ago
- MetaPred2CS Web server is a meta-predictor based on Support Vector Machine (SVM) that combines 6 individual sequence based protein-protein interaction...
2614 days ago
- CrossMap is a program for convenient conversion of genome coordinates (or annotation files) between different assemblies (such as Human hg18 (NCBI36) <> hg19 (G...
3003 days ago
- .... It is also available through a simple web interface or you can use the API for NCBI Remap. More at http://www.ncbi.nlm.nih.gov/genome/tools/remap API http://www.ncbi.nlm.nih.gov/genome/tools/remap/docs/a...
3000 days ago
- ...e used for centromere identification for a large number of yeast species, even with a limited amount of Hi-C sequencing. Paper:http://www.ncbi.nlm.nih.gov/pubmed/25940625 More at...
2999 days ago
RACA: Reference-Assisted Chromosome Assembly
...s generated by NGS and assemblers into longer chromosomal fragments using comparative genome information and paired-end reads. http://www.ncbi.nlm.nih.gov/pubmed/23307812 http://b...2945 days ago
PEAR: a fast and accurate Illumina Paired-End reAd mergeR
...in a couple of minutes on a standard desktop computer. More at http://www.exelixis-lab.org/web/software/pear Paper: http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3933873/2945 days ago
- ...nd metagenome assembly accuracy, which can be used to identify misassemblies or to optimize the assembly process. More at http://www.ncbi.nlm.nih.gov/pubmed/23303509
2925 days ago
- Platanus is a novel de novo sequence assembler that can reconstruct genomic sequences of highly heterozygous diploids from massively parallel shotgun sequencing data....
2908 days ago
