Results for "Next Generation"
Top-level pages
...high-throughput DNA sequencing, so called the “high-throughput next generation sequencing” (HT-N...ble language to handle ever growing genome or protein sequences. The next step after reading genetic code is...3941 days ago
- "Bioinformatics is a science of biological predictions and analysis" -- Jitend...J, Zhang Z, Miller W, Lipman DJ (1997) Gapped BLAST and PSI–BLAST: a new generation of protein database search pr...
3941 days ago
Useful Publications and Websites for Deep Sequencing Data Analysis
...o transcriptome assembly from next-generation sequencing data. Surget-Groba...iscovery and genotyping using next-generation sequencing. Davey et al....framework for analyzing next-generation DNA sequencing data. McKenna...ng genes near ChIP-seq peaks Next-gen-seq software - a list of softwa...3773 days ago
List of bioinformatics open source projects/software.
...romoter analysis by Kappa) software program used for promoter pattern generation and promoter analysis....Genome Analysis Toolkit 1.0 (GATK 1.0) a software package to analyse next-generation resequencing data3750 days ago
List of generic simulation software/tools/resource with brief description and homepage !!!
...ethods in statistical genetics by generating samples of family data based on user specified models. http://research.nhgri.nih.gov/gasp/GemSIM Next generation sequencing read simulator htt...3731 days ago
Next generation sequencing in R or bioconductor environment
There are many R software and bioconductor packages for NGS data analysis, some of them are as follows Biostrings The Biostrings package from Bioconductor provides an a...3618 days ago
Commercial and public next-gen-seq (NGS) software
...or Unix. gnumap - The Genomic Next-generation Universal MAPper (gnumap) is...ns of short reads, emerged by next-generation sequencing technology, back t...reads. From CNS in France. MapNext - MapNext: A software tool for spli...ornia, BerkeleyNGS-Trex: Next Generation Sequencing Transcriptome prof...3512 days ago
Software packages for next gen sequence analysis
...ix - Integrated Solutions for Next Generation Sequencing data analysi...Unix. * gnumap - The Genomic Next-generation Universal MAPper (gnumap) is...ns of short reads, emerged by next-generation sequencing technology, back t...P5 once completed will handle next-gen sequencing data. A partially im...3236 days ago
- Reformat is a member of the BBMap/BBTools package. It is a multipurpose tool design...Quality trimming (either or both ends) Quality filtering Fixed-length trimming Generation of histograms (base compositi...
2707 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
...d ChIP, and methylation. Next Generation Sequencing (NGS) workflows in...Supports all commercial next generation sequencing and microarray fil...rence allele loci from second generation sequencing data”; Bayes...especially for automated set-generation and enrichment of likely func...2902 days ago
