BOL

Results for "Onliner"

Wire posts

• • Rahul Nayak@rahul

  

  Linux onliner for bioinformatician https://github.com/stephenturner/oneliners #Linux #Onliner

  3661 days ago

• • Rahul Nayak@rahul

  

  Sort FASTA sequence by length: cat f1.fasta| awk '{if($0 ~ /^>/){printf "%st", $0}else{print length($0)"t"$0}}'| sort -k2n,2| awk '{print $1"n"$3}' > sequence.fasta #Sort #Fasta #Trick #Onliner

  3186 days ago

• • Jit@jit.aber

  

  NGS onliner http://userweb.eng.gla.ac.uk/umer.ijaz/bioinformatics/subsetFASTAFASTAQ.html #OneLiner #NGS

  2558 days ago

• • Neelam Jha@neelam

  

  Perl onliner to add string to each of the fasta header. $ perl -p -e 's/^(>.*)$/$1-origin/g' in.fasta > out.fasta #String #Header #Fasta

  1616 days ago