Results for "Open Source Codes"
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Recent studies of the human genome have indicated that regulatory elements (e.g. promote...lements. These interaction datasets are important resources to infer distal gene targets...Apache Tomcat web server and MySQL database and the sourc...2882 days ago
- Kaiju is a program for the taxonomic classification of metagenomic high-throughput sequencing...sensitive taxonomic classification for metagenomics with Kaiju. Nat. Commun. 7:11257 (open...
2882 days ago
Fancy Oneliner for Bioinformatics !!
This webpage lists some of the one-liners that we frequently use in metagenomic analy...same naming conventions and folder structures as we have. We are sharing these codes with the intention that if th...2872 days ago
- The programs are listed in alphabetical order, Look at the individual applications or go to the GROUPS page to search by category. EMBASSY applications are described in separate documentation for each package. Applications in the current release
2852 days ago
- Bambus 2.0, the second generation Bambus scaffolder available as an open source package. While most other scaffolders are c...ta other than specified by mate-pairs. Such sources of information include align...ynteny. Home Page: http://sourc...
2832 days ago
EUKulele: Taxonomic annotation of the unsung eukaryotic microbes
EUKulele, an open-source software tool designed to assign taxonomy to microeukaryotes detected in meta-omic samples, and complement analysis approaches in other domains by accommodating assembly output and providing concrete metrics reporting the taxonomic completeness of each sample.1239 days ago
AutoDock Vina: an open-source program for doing molecular docking.
AutoDock Vina is an open-source program for doing molecular docking. It was designed and implemented by Dr. Oleg Trott in the Molecular Graphics Lab at...1435 days ago
- Recent technological progress has greatly facilitated de novo genome sequencing. However, de novo&nb...igs. Software requirements BLAT (tested with Standalone BLAT v. 32×1). Sourc...
2824 days ago
- Summary: GenomeScope is an open-source web tool to rapidly estimate the overall characteristics of a genome, including genome size, heterozygosity rate, and repea...
2359 days ago
- The blog is a collection of script examples with example data and output plots. R produce excellent quality graphs for data analysis, science and business presentation, publications and other purposes. Self-help codes and examples are provided. Enjoy nice graphs !!
2752 days ago
