Results for "Operating System"
Bio-Scripts
# To follow these instructions, we'll assume your system admins have already installed t...se essentials: # Debian/Ubuntu system admins should run: sudo apt-...-dev libxml2-dev # RHEL/CentOS system admins should run: sudo yum...to use this Perl instead of the system Perl: export PERL5LIB="$PERL...2145 days ago
- #!/usr/local/bin/perl -w # NOTE: YOU MUST CHANGE THE LINE ABOVE TO POINT TO # THE FULL PATH OF THE PERL EXECUTABLE ON YOUR SYSTEM. # System requirements: requires perl a...
2694 days ago
BASH script for SelfBLAST a genome
#!/bin/bash #self BLAST a genome -- Expecting you have blast and samtools installed in your system #Author: Jitendra Narayan #...2653 days ago
- my @ids =qw (scaffold_4 scaffold_4 scaffold_15 scaffold_40 scaffold_44 scaf...foreach my $i (@ids) { print "Working on $i\n"; mkdir $i; system ("./actor.sh $i"); system ("cp *.* $i"); }...
2467 days ago
Perl script to find missing and move to desire folder
#!/usr/bin/perl -w use strict; use warnings; open(my $ids, "2240 days ago
- ➜ Tools git:(master) ✗ git clone git://...figure && make checking build system type... x86_64-pc-linux-gnu checking host system type... x86_64-pc-linux-gnu...ALL' [nyae]? n checking build system type... x86_64-pc-linux-gnu...: --with-boost checking build system type... x86_64-pc-linux-gnu...
2152 days ago
Perl script to find the distance beetween all the contigs and scaffolds
#!/usr/bin/perl use strict; use warnings; use Bio::SeqIO; $| = 1; #Script to s...\n"; close $ofh or die "Could not close file '$tmpFile' $!"; $cnt++; system ("mafft --retree 1 --maxitera...2141 days ago
Perl script to run SATSUMA in loop !
#!/usr/bin/perl -w use strict; use File::Temp qw(tempfile); # Usage perl 1by1.pl for SATSUMA analysis # User need to set the reference multifasta file name here...2141 days ago
Install Parrot Virtual Machine !
#Parrot is a virtual machine designed to efficiently compile...lo, I'm Configure. My job is to poke and prod your system to figure out how to build P...env.........both. auto::timespec - Does your system has timespec....................1538 days ago
- ➜ Tools git:(master) ✗ git clone https://github.com/Nextomi...cpp:219:22: warning: ignoring return value of ‘int system(const char*)’, declared with attribute warn_unused_result [-Wunused-result] system(move.c_str());...
2099 days ago
