Bioinformatics tools to detect horizontal gene transfer (HGT) in genomes
...in the recipient genome and provide novel function. Following are the popular tool to detect HGT in geno...HGT detection / download binary (!license!) 20181081 TREE-PUZZLE / 5.3.rc16 HGT...865 days ago
Python learning resources for bioinformatics and computational biologist !
Python is a general-purpose language, which means it...telligence, and scientific computing. Many developers have als...ython (3.x) (HTML, PDF, EPUB, Mobi) A Guide to Python's...tion) How to Think Like a Computer Scientist: Learning with P...me (3.3) Programming Computer Vision with Python (P...2270 days ago
Some useful Bioinformatics links
...f de novo genome assemblies based on chromatin interactions. - PubMed - NCBI https://www.ncbi.nlm.nih.gov/pubmed/24185095 MAFFT ver.7 - a...https://www.nature.com/articles/nmeth.3444 vezzi/FRC_align: Computes FRC from SAM/BAM file and...2257 days ago
2232 days ago
Installing Bio::SCF perl module
...nvironment is sane... yeschecking for gawk... gawkchecking whether make sets $(MAKE)... yeschecking for gcc... gccchecking for C compiler default output file name... a.outchecking w...2233 days ago
Tools to Predict the Impact of Missense Variants !
...ed substitutions.” Rejected substitutions are a natural measure of constraint that reflects the strength of past purifying selection on the element” phyloP“Compute conservation or acceleratio...2218 days ago
Protein-Protein Interaction Sites Predictions !
The study of Protein–Protein Interactions (PPIs) has a crucial role in biology, medicine and the pharmaceutical industry. PPIs can be investigated from two aspe...2217 days ago
Ligand Docking Tools and Software !
...uch larger macromolecule ("target"). The following is partial list of docking software, focusing on free (at least for academic institutes) and/or popular docking tools. Auto...2217 days ago
2205 days ago
Learning Python Programming - a bioinformatician perspective !
...ython Programming is a general purpose programming language tha...hon and biopython is getting more popularity due to its easy-to-use...ies for doing complex scientific computing (although we won't encoun...e program code and generates the output. Python is dynamically type...2198 days ago