2707 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
..., free-standing multi-application package-- SNP/Indel analysis, CNV pre...anopore Reads, written in Python; Package comes with 3 programs, margin...tic caller; unlike other software packages, treats effects fully probab...rmat) into R”; Command line package program; Published August 201...2902 days ago
Genome Assembly Tools and Software - PART1 !!
...task adopting a very efficient strategy. The package integrates the Oases pipeline...luation DETONATE consists of two component packages, RSEM-EVAL and REF-EVAL. Bot...ng Short Reads, especially for RAD Rainbow package consists of several programs...2679 days ago
Awesome perl frameworks, libraries and software - PART 1
...job queue fletcher/MultiMarkdown-CMS - Package to assist with publishing a w...tured logger for Fluentd (Perl) dann/p5-cpan-packager - CPAN::Packager is a t...tion Protocol atom/language-perl - Perl package for Atom ewels/clusterflow&n...2483 days ago
2483 days ago
Alignment-free sequence comparison tools available for next-generation sequencing data analysis
...NGS reads using alignment-free sequence dissimilarity measures d2* and d2 S under different Markov chain models (using k-words) R package http://www-rcf.usc.edu/~fsun...2365 days ago
Bioinformatics Web Application Development with Perl
...verage app might need in a single download. It's still fully compatible with the CPAN, but the intention is to provide good working defaults in a package that's easy to start with. Mo...2315 days ago
Some useful Bioinformatics links
.../08/05/creating-a-coverage-plot-using-bedtools-and-r/ Eval: A software package for analysis of genome annota...du/media/software/eval-documentation.pdf OmicCircos: A Simple-to-Use R Package for the Circular Visualizatio...2235 days ago
Installing Bio::SCF perl module
...taden.sourceforge.net). This can be downloaded from https://sourceforge.net/project/showfiles.php?group_id=100316&package_id=108243&release_id=340318 confirm that the package installed correctly look for...2212 days ago
2184 days ago