List of generic simulation software/tools/resource with brief description and homepage !!!
...he Flux Simulator aims at providing a deterministic in silico reproduction of the experimental pipelines for RNA-Seq, employing a minimal set of parameters. http://flux.sammeth.net/simu...3729 days ago
List of In-silico Binding Site Prediction Tools
...tify putative contacting residues. However, whilst most of this prediction process can be automated, visual inspection and manual adjustments of parameters, such as the distance thresho...3736 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
...on in one interval of a genetic map), linkmap (calculates location scores for positions of a disease locus along a marker), and ilink (estimates parameters including recombination fract...2900 days ago
Source Code and Pseudo Code !!
...d is language independent. Case...EndCase; If...Endif; Call ... with (parameters); Call; Return ....; Return;...ion headers should appear as: Note that in C, arguments and parameters such as "fieldn" could be wri...2651 days ago
Perl Special Vars Quick Reference
$_ The default or implicit variable. @_ Subroutine parameters. $a$b sort comparison routine variables. @ARGV The command-line args. Regular Expression...2636 days ago
2343 days ago
List of visualization tools for genome alignments
...proving analysis protocols, testing data quality, and generating result drafts. Its integration in analysis pipelines allows the optimization of parameters, which leads to better result...2275 days ago
Tools for Protein-Protein Docking !
...desolvation energy RosettaDock Local rigid search: Monte Carlo with low and high resolution structure representation levels Different scoring parameters for the different resolutions...2194 days ago
2182 days ago
Frequent parameters for bioinformatics tools !
Third party executable parameters and options. Trimmomatic “ILLUMINACLIP:...:2:30:10” “LEADING:15” “TRAILING:15” “SLI...1277 days ago