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Results for "Perl"

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  • Rahul Nayak

    Remove the fasta description and just keep the identifier. perl -p -i -e 's/>(.+?) .+/>$1/g' sample1.fa #Perl #Oneliner #Trick #Tips #Fasta #Identifier #Remove

    Tags: Perl, Oneliner, Trick, Tips, Fasta, Identifier, Remove

    3157 days ago

  • Rahul Nayak

    To uninstall a perl module $ cpanm --uninstall <Module::Name> #Perl #Trick #Uninstall #Module

    Tags: Perl, Trick, Uninstall, Module

    3012 days ago

  • Jit

    Print all the values between 15 to 17. perl -ne 'print if 15 .. 17' file #Perl #PerlTrick #Range

    Tags: Perl, PerlTrick, Range

    3005 days ago

  • Jit

    BioToolbox

    This is a collection of libraries and high-quality end-user scripts for bioinformatic analysis, including working with gene annotation, collecting data scores from a variety of modern file formats, and conversion between file formats. The Bio::ToolBox libraries provide a unified, abstracted inter...

    Tags: Bioinformatics, Guide, Tutorial, Perl, Script, Toolbox, Bio

    2994 days ago

  • Neelam Jha

    Delete space from FASTA header: perl -pe 's/>\S+\K.+//' < file.fasta > new_file.fasta #PerlOneLiner #Trick #Perl #Space #Fasta

    Tags: PerlOneLiner, Trick, Perl, Space, Fasta

    2975 days ago

  • Jitendra Prajapati

    Scientist - Computational Genomics (Two Positions)

    ICRISAT is a non-profit, non-political organization that conducts agricultural research for development in Asia and sub-Saharan Africa with a wide array of partners throughout the world. Covering 6.5 million square kilometers of land in 55 countries, the semi-arid tropics is home to over 2 billio...

    Tags: Bioinformatics, ICRISAT, Scientist, Computational Biologist, SQL, Python, Perl, India

    2972 days ago

  • Jit

    Print all text after a matching string perl -ne "print unless 1 .. m(String)" #Perl #OneLiner #String #Perl #Trick

    Tags: Perl, OneLiner, String, Perl, Trick

    2971 days ago

  • Jit

    Perl Scripts for Science and Engineering http://www.lwebzem.com/cgi-bin/se_res/scripts.cgi #Perl #Script #Science

    Tags: Perl, Script, Science

    2912 days ago

  • Neelam Jha

    CSBB-v1.0

    CSBB is a command line based bioinformatics suite to analyze biological data acquired through varied avenues of biological experiments. CSBB is implemented in Perl, while it also leverages the use of R and python in background for specific modules. Major focus of CSBB is to allow users from biolo...

    Tags: Bioinformatics, CSBB-v1.0, Tools, Modules, Packages, Analyse, Perl, R

    2863 days ago

  • Jit

    Remove tab with comma in file: perl -lpe 's/\t/,/g' < flattened_line_0.fa.data > output.csv #PerlTrick #PerlO,liner #Perl #Tab #Comma

    Tags: PerlTrick, PerlO, Perl, Tab, Comma

    2828 days ago

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