Results for "Perl Script"
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...ibraries and high-quality end-user scripts for bioinformatic analysis...ltiple data files. They rely on BioPerl SeqFeature libraries and rela...The Bio::ToolBox package includes scripts for setting up databases of...ersion. More at http://cpansearch.perl.org/src/TJPARNELL/3013 days ago
- Generic Genome Browser Version 2: A Tutorial for Administrators This is an extensive tutorial to take you thr...Browse as a server. This tutorial assumes that you have successfully set up Perl, GD, BioPerl a...
3013 days ago
- AccNET is a Perl application that presents a new way to study the accessory genome of a given set of organisms. Using the proteomes of these organisms, AccNET create a...
2783 days ago
- ...Bioinformatics and Computational Biology special issue : Quality assessment and control of high-throughput sequencing data). It contains bash/perl/R scripts for running the analysis pre...
2898 days ago
Linux command line exercises for NGS data processing
The purpose of this tutorial is to introduce students to the frequently used tools for NGS analysis as well as giv...ipulate NGS data as compared to the other command line tools such as grep, sed, perl e...2889 days ago
- CSBB is a command line based bioinformatics suite to analyze biological data acquired through varied avenues of biological experiments. CSBB is implemented in Perl,...
2882 days ago
OPERA : Optimal Paired-End Read Assembler
OPERA (Optimal Paired-End Read Assembler) is a sequence...urthermore, our latest release contains the wrapper script OPERA-long-read that enables...g technologies (PacBio or Oxford Nanopore). The manuscript describing the new features a...2811 days ago
- Fermi is a de novo assembler with a particular focus on assembling Illumina sho...rge shared memory. The easiest way to run fermi is to use the run-fermi.pl script. It generates a Makefile...
2811 days ago
- Visualization has played an extremely important role in...CYTH1 and EIF3H. While it has been found in the transcriptome previously, genome sequenc...e web tool for viewing complex genomic alignments. Script at https://github.com/Ma...
2769 days ago
- The blog is a collection of script examples with example data and output plots. R produce excellent quality graphs for data analysis, science and business presentation, publications and other purposes. Self-help codes and examples are provided. Enjoy nice graphs !!
2754 days ago
