Results for "Phred"
Top-level pages
...the sample of interest. Genotype likelihoods are usually expressed as a Phred-scaled probability, where P =...ful for identifying structural rearrangements, including gene fusions. Phred-scaled probability: a scaled...2877 days ago
Genome Assembly Tools and Software - PART1 !!
...nose, report, and automatically improve de novo genome assemblies. Phred/Phrap/Consed 29.0 – DNA...tection, available for Windows and Mac OS X. Aligner is compatible with Phred-Phrap and fully supports sequ...2694 days ago
- ...--cov-cutoff <float> coverage cutoff value (a positive float number, or 'auto', or 'off') [default: 'off'] --phred-offset <33 or 64> PHRED quality offset in the input r...
2359 days ago
A quick guide to Phred scaling
A quick guide to Phred scaling• Phred value = −10 * log10(ε)• Examples:• 90% confidence (10% error rate) = Q10• 99% confidence (1% error rate) = Q20&bul...1542 days ago
Frequent parameters for bioinformatics tools !
...o; “SLIDINGWINDOW:4:20” “MINLEN:20” “TOPHRED33” Filtlong -... SPAdes --careful --disable-gzip-output --cov-cutoff auto --phred-offset 33 HGAP Pbal...1294 days ago
