Metagenomics assembly workshop !!
...ing. The Tutorial Data Set FastQC Quality Control Assembly Velvet Assembly MEGAHIT Assembly IDBA-UD Assembly Ray Assembly Gene Prediction Assembly Evaluation Read...2573 days ago
NCBI Prokaryotic Genome Annotation Pipeline
...plasmids). Genome annotation is a multi-level process that includes prediction of protein-coding genes, as w...tic genome annotation pipeline that combines ab initio gene prediction algorithms with homology base...2545 days ago
DarkHorse: a method for genome-wide prediction of horizontal gene transfer
...etic tree-building procedures to improve accuracy and efficiency. The method is also useful for retrospective assessments of horizontal transfer prediction reliability, recognizing orth...2508 days ago
RNAcon: web-server for the prediction and classification of non-coding RNAs
RNAcon is a web-server for the prediction and classification of non-coding RNAs. It u...een coding and ncRNAs and RandomForest-based prediction model for the classification...properties were used for the development of prediction model. The standalone v...2483 days ago
2348 days ago
JPred4: A Protein Secondary Structure Prediction Server
JPred4 (http://www.compbio.dundee.ac.uk/jpred4) is the latest version of the popular JPred protein secondary structure prediction server which provides predictions by the JNet algorithm, one of the most accurate methods for secondary structure prediction.2317 days ago
Alien_Hunter : prediction of putative Horizontal Gene Transfer (HGT) events
Alien_hunter is an application for the prediction of putative Horizontal Gene Transfe...pared to fixed-order methods. Optionally the predictions can be parsed into a 2-state...the boundaries of the predicted regions. The predictions (embl format) can be automat...2308 days ago
GenomeTools: The versatile open source genome analysis software
...y named gt. It is based on a C library named “libgenometools” which consists of several modules. If you are interested in gene prediction, have a look at GenomeTh...2277 days ago
Protein Subcellular Localization Prediction
Assigning subcellular localization to a protein is an important step towards elucidating its interaction partners, function, and potential role(s) in the cellular machine...2256 days ago
Reference-free prediction of rearrangement breakpoint reads
lideSort-BPR ( b reak p oint r eads) is based on a fast algorithm for all-against-all comparisons of short reads and theoretical analyses of...2249 days ago