Results for "Protein sequence/structure annotation"
Users
Skills: Protein sequence/structure annotation2301 days ago
Blogs
How to install Perl modules manually, using CPAN command, and other quick ways
As a bioinformatics programmer, and crunchy data analyser you need to install several perl modules and dependencies. Installing Perl modules manually by resolving all the...3952 days ago
Five points for bioinformatics software/tools
In the bioinformatics sector we mostly spend time on computational analysis of huge amounts o...ou are doing. This is particularly true in the case of genome assembly and annotation. At the end, I would like to...3709 days ago
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Bookmarks
- Bioinformatics is developing very rapidly. With new tools and software it is, now a days, e...bioinformatics: assembling genomes, comparing DNA and protein sequences,...ees, analyzing genome rearrangements, and identifying proteins....
3947 days ago
Download mutliple fasta file from NCBI in one GO!!
if you have less time, then use three ways mentioned in bookmark link to extract/download all fasta sequences in single click given that you already have a list of GIs or...3912 days ago
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Files
Bioinformatics approach to Boar Taint
Meat products obtained from intact male pigs often produce offensive smell or odour which is...he basis of SNP quality, coverage of SNP allele, functional and structural annotation, and repeats, etc. Selected S...3791 days ago
Master Thesis: Trans-membrane topology prediction through Markov based decoders
Abstract: Background/Motivation: The dearth of structural information on alpha helical membrane protein (MPs) has hindered thus far t...atic prediction of trans-membrane (TM) protein structure....sequences in a standard dataset of 86 proteins w...3947 days ago
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Discussion topics
- The key to finding a solution is to notice that most genomicsequences differ by very little. It may well be that the number of complete genome sequences being stored...
3922 days ago
how could be a molecular dynamics be helpful studying the protein's conformation
give your views3490 days ago
Pages
Bio++ : C Language libraries for your biological need
C has always been a language that never attempts to tie a programmer down - it allows for e...ite objects, with various Alphabet support (DNA, RNA, Proteins, Codons,...SO78, JTT92 + any PAML-formated model description for proteins,...3950 days ago
- Ruby was created by Yukihiro Matsumoto, who wished to create a new language that balanced fun...Quick Referencehttp://www.zenspider.com/Languages/Ruby/QuickRef.html Ruby Annotationhttp://www.w3.org/TR/ruby/ Ru...
3949 days ago
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Top-level pages
- The completion of the first human genome drafts was just a start of the modern DNA sequencing era whi...el us to learn new biologically suitable language to handle ever growing genome or protein se...
3950 days ago
- ...h as determination of DNA and protein sequences, investigation of protein functions, development of pha...ed protein sequences and more annotations descri...d databases (mostly errors in annotation), in particular since errors...the subcellular location of a protein. The ultimate goal of sequence...
3949 days ago
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Wire posts
News
100K Foodborne Pathogen Genome Project
The 100K Genome Project, led by the University of California, Davis, the U.S. Food and Drug Administration’s Center for Food Safety and Applied Nutrition, and Agile...3925 days ago
Chromatin: From nucleosomes to chromosomes, 30 April - 2 May 2014
EMBL-EBI announced the Wellcome Trust Scientific Conference Chromatin: From nucleosomes to chromosomes, which continues EMBL-EBI series of meetings focused on fundamental...3927 days ago
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Opportunity posts
Structural polymorphism analysis from NGS data
The LabEx BASC (Biodiversity, Agroecosystems, Society, Climate), a network of 13 laboratories of the...ritical to establish a link between sequence variation, functional variation, gene/protein ex...3951 days ago
- van Noort Group is looking for PhD fellows We currently access an unprecedented knowledge on the b...on. Experience with high throughput sequencing analysis methods, machine learning, protein in...
3951 days ago
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ResearchLabs posts
- The group develops algorithms for a diverse set of problems in computational molecular biology. They are particularly interested in predicting specificity in protein in...
3951 days ago
- The human genome project and similar projects in disease-causing organisms such as Plasmodium falciparum, which causes malaria in humans, have provided new tools for disc...
3950 days ago
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Fun
Bioinformatician become producer/director !!!
If a Bioinformatician starts producing Hindi Bollywood movies, names will be like this.... BLAST : Eak khoj Munna Bhai Promoter Gene se Genome tak. Maine BLAST kiya...3920 days ago
The Best Bioinformatics / Computational Biology Quotes
Bioinformatician are not anti-social; We are just genome friendly. Bioinformatician would love to...might be the next curator! Beware of computational biologist they screw genes and protein....3722 days ago
Video
- http:--www.biotechnology.jhu.edu- Tutorial for PSI-BLAST, an extension of BLAST that uses matrix algebra. BLAST is a cornerstone bioinformatics tool at NCBI. BLAST is the Basic Local Alignment Search tool and will protein and DNA sequences that are related to a sequence that the user provides.
3910 days ago
Bioinformatics -- Understanding of living systems through information science
Recently, the progress of the Human Genome Project, aiming to decode all human DNA sequences, has highlighted a research field called bioinformatics. In this new field, c...3919 days ago
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Bio-Scripts
R script to visualize fastANI core-genome comparison
####### # Purpose: Visualize fastANI core-genome comparison # Usage: Rscript # Output: .pdf # Uses genoPlotR package: http://genoplotr.r-forge.r-project.org #...1103 days ago
BioPerl to convert between sequence formats from Fasta to Genbank
#!/usr/local/bin/perl -w # Sequence formats to choose: Fasta, EMBL. GenBank, Swissprot, PIR and GCG use Bio::SeqIO; $inFile = "BRCA2.fa"; $in = Bio::SeqIO->n...2918 days ago
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Tryst
Tryst with a Bioinformatician # Dr Altan Kara
Dr Altan Kara is a Bioinformatics specialist at the faculty of Gene Engineering and...on this profile. Alterations in the gene, transcript, protein, and metab...the interaction between the prokaryotic two-component proteins....2364 days ago
Groups
Ruby is a dynamic, reflective, general-purpose object-oriented programming language that combines syn...in Japan. BioRuby is a package of Open Source Ruby code, with classes for DNA and protein se...3922 days ago
This group is being designed to cover some of the common algorithms underlying the followin...bioinformatics: assembling genomes, comparing DNA and protein sequences,...ees, analyzing genome rearrangements, and identifying proteins.3904 days ago
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