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Results for "Quality"

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• • Jit@jit.aber

  

  #Convert #FASTQ to FASTA and set bases of #quality lower than 20 to N $ seqtk seq -aQ64 -q20 -n N IN.fastq > OUT.fasta

  Tags: Convert, FASTQ, quality

  986 days ago

• • Neelam Jha@neelam

  

  GenomeQC: a quality assessment tool for genome assemblies and gene structure annotations

  The GenomeQC web application is implemented in R/Shiny version 1.5.9 and Python 3.6 and is freely available at https://genomeqc.maizegdb.org/ under the GPL license. All source code and a containerized version of the GenomeQC pipeline is available in the GitHub repository https://gi...

  Tags: GenomeQC, quality, assessment, tool, genome, assemblies, gene, structure, annotations

  714 days ago

• • LEGE@lege

  

  OMArk: software for proteome (protein-coding gene repertoire) quality assessment

  OMArk is a software for proteome (protein-coding gene repertoire) quality assessment. It provides measures of proteome completeness, characterizes the consistency of all protein coding genes with regard to their homologs, and identifies the presence of contamination from other species. OMArk reli...

  Tags: OMArk, software, proteome, protein-coding, gene, repertoire, quality, assessment

  71 days ago

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