Results for "R"
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This software is designed to identify both simple and complex rearrangements from paired-end sequencing data. Users coul...ran it easily by just alling SVelter.py with proper parameter... https://github.com/mills-lab/svelter/3000 days ago
- Destruct is a tool for joint prediction of rearrangement breakpoints from single or multiple tumour samples. More at https://bitbucket.org/dranew/destruct
3000 days ago
- Machine Learning in Python Simple and efficient tools for data mining and data analysis Accessible to everybody, and reusable in various contexts Built on NumPy, SciPy, and matplotlib Open source, commercially usable - BSD license More at http://scikit-learn.org/stable/index.html
3000 days ago
- Ultrafast and accurate nucleotide-resolution analysis of structural variants More at http://bioinform.github.io/breakseq2/ Download BreakSeq2 Latest version: https..., see "releases". https://github.com/bioinform/breakseq2/releases
3000 days ago
Pattern Searching in a Single Genome
Pattern searching holds much importance for biologists , for the understanding of DNA ( and its functionality) can be more than a matter of satisfying...ny issuess uchas medical conditions . However,there are a number of ways of...2994 days ago
- Picard is a set of command line tools for manipulating high-throughput sequencing (HTS) data and formats such as SAM/BAM/CRAM and VCF. These file formats are...specification. Note that the information on this page is targete...under the MIT license and free for all uses. Enjoy!...
2941 days ago
- GA4GH Data Working Group Led by David Haussler (UCSC) and Richard Durbin (Sanger Institute), the Data Working Group (DWG) of the Global Alliance brings together the leading Genome Institutes and Centers with IT industry leaders to...
2980 days ago
RNA-Seq De novo Assembly Using Trinity
Trinity, developed at the Broad Institute and the Hebrew University of Jerusalem, represents a novel method for the...ge volumes of RNA-seq reads. Trinity partitions the sequence...: Inchworm assembles the RNA-seq data into the unique se...ll-length transcripts for alternatively spliced isoforms, and...2978 days ago
- Easyfig has moved to github, for newer releases of Easyfig please visit our new webpage - https://mjsull.github.io/E.... Easyfig is a Python application for creating linear comparison fi...ce (GUI). More at http://easyfig.sourceforge.net/
2941 days ago
Awesome bioinformatics pipelines !
A curated list of awesome pipeline toolkits ... https://github.com/pditommaso/awesome-pipeline2970 days ago
