Find certain files/documents in Linux OS
...ctory of owner root.# find / -user root -name gene.txt23. Find all Files Based on UserTo find all files that belongs to user Rahul under /home directory.# find /home -user rahul24. Find all Files Based on...3683 days ago
Check Linux server configuration !!
...rver details before running our programs or tools. Here I am showing...rmation.To check what version of Operating System is installed on th...sp; :core-3.1-ia32:core-3.1-noarch:graphics-3.1-ia32:graphics-3.1-no...ents that server is having 32bit operating system)[root@localhost ~]...3653 days ago
Linux Sort Commands for Bioinformatics
...umn as numbers, descending order; if identical, sort the 3rd as strings, ascending order:sort -k2,2nr -k3,3 input.txt sort starting from the 4th character at column 2, as numbers:s...3628 days ago
Monitor running jobs on Linux server
...s a bioinformatican run lots of program on your servers. Sometime th...etime need to check the running programs and want to monitor the run...9 days, 2 user, load average: 0.00, 0.00, 0.00The first...used to “swap” out programs from main memory. Again, we...3622 days ago
3616 days ago
A guide for complete R beginners :- R Syntax
...o a function, including options, are in brackets. Note that all dat and options are separated by a comma Function(dat...or help pages that might relate to the phrase ‘t test’ NOTE:...functions, same as help.search(‘phrase’) ??“t test&...3359 days ago
A guide for complete R beginners :- Getting data into R
...ion already. mydata Now mydata is a data frame with multiple vectors each...excel files: not covered here) columns are separated by any number of tabs or s...$A) We can shortcut having to type the data frame each time by attaching it...3359 days ago
A guide for complete R beginners :- Installing R packages
...ason R has become so popular is the vast array of packages available at the cran and bioconductor repositorie...("ggplot2", lib="/data/Rpackages/")> library(ggplot2, lib.loc="/data/Rpa...: > install.packages("ggplot2")> library(ggplot2) just works! Sett...3359 days ago
3270 days ago
Genome Assembly Tools and Software - PART2 !!
...d variant caller that can generate high quality assemblies and...Whole Genome Shotgun AssemblerAMOS (AModular, Open-...ssemble it. It allows for the rapid discovery of errors and co...ucleotide to nucleotide error rates to determine what types of...2687 days ago