List of Bioinformatics Software Tools for Next Generation Sequencing
...nt tools including alignment, RNA-Seq, DNA-Seq, ChIP-Seq, Small RNA-Seq, Genome Browser, visualiz...annels for analysis of single RNA/DNA structures) software pipe...using integration of DNA and RNA seq data-- boosts sensitivity...genomes (plus many other external sites); Only GRCh27 coordina...2909 days ago
Tools for Searching Repeats And Palindromic Sequences
...rotranscripts, SINES - Non-functional copies of RNA genes which have been reinteg...leotides along a DNA (deoxyribonucleic acid) or RNA (ribonucleic acid) strand tha.... Related to the direction of transcription by RNA polymerase, DNA strands have...2212 days ago
2870 days ago
Genome Assembly Tools and Software - PART1 !!
...De Novo Transcriptome Assembly from RNA-seq Data BinPacker is a no...ome Assembly pipeline from stranded RNA-Seq reads Comprehensive an...ned introns, novel introns, and alternative splicing. Its scripts can...nscriptome assembler that assembles RNA-seq reads into transcripts. S...2686 days ago
Phylogenetic & Molecular Genetics Terms and Definitions
...ideally reflects evolutionary history. cDNA -- Complementary DNA; DNA that is synthesized, by reverse transcriptase, from a Messenger RNA template ( Messenger RNA contains the coded informatio...2463 days ago
Alignment-free sequence comparison tools available for next-generation sequencing data analysis
...cript abundance quantification from RNA-seq data (uses pseudoalignmen...dances from reference sequences and RNA-seq data (k-mer based) Softw...the expression of transcripts using RNA-seq data (uses k-mers)...ng gene k-mers profiles of the RNA-seq paired-end reads Softwar...2372 days ago
2352 days ago
Single Cell RNAseq data analysis tutorial !!
...Following are the useful links: Single Cell RNAseq data analysis Tutorial A...workflow for low-level analysis of single-cell RNA-seq data A step-by-step work...ble latent-factor models applied to single-cell RNA-seq data separate biological...2351 days ago
2351 days ago
Webinar on RNA-Seq Data Analysis on 28 Feb 2018
...workflow for the analysis and visualization of RNA-Seq data. This webinar will g...UMI support and elastic genome browser used in RNA-Seq workflow that supports la...ar will give an overview of the features in the RNA-Seq data analysis workflow in...2265 days ago