Results for "RNAseq"
Bookmarks
Next Generation Sequencing (NGS) Tutorials
...www.nbic.nl/education/nbic-phd-school/course-schedule/ngsmetagenomics/ RNASeq:http://www.nbic.nl/education/nbic-phd-school/course-schedule/ngsrnaseq/ Bioinformatics and Seq cour...3488 days ago
Bioinformatics algorithms tutorials
...NGS AssemblyAlgorithms for PacBio ReadsSoftware and Hardware Concepts for BioinformaticsFinding us in Homolog.us (Search Algorithms)NGS Genome and RNAseq Assembly - a Hands on PrimerI...3604 days ago
- +11 more Bookmarks
Top-level pages
Next generation sequencing in R or bioconductor environment
...ariety of additional R packages are available for normalizing RNA-Seq read count data and identifying differentially expressed genes (DEG): easyRNASeq (simplifies read counting per...3625 days ago
Commercial and public next-gen-seq (NGS) software
Integrated solutions CLCbio Genomics Workbench - de novo and reference assembly of Sanger, Roche FLX, Illumina, Helicos, and SOLiD data. Commercial next-gen-seq softwar...3520 days ago
- +3 more Top-level pages
Wire posts
Opportunity posts
- ...theoretical and practical aspects in: - Genomes comparisons, - Evolutionary analyses (orthologs, paralogs and ancestral genomes inference), - RNAseq and Next Generation Sequencin...
3789 days ago
Biinformamatics Lead at Google Life Sciences
...al tools for sequence-based assays (assembly, annotation, variant calling and interpretation, phasing, genome structure, etc.), expression assays (RNAseq and microarray), proteomics,...3489 days ago
- +4 more Opportunity posts
ResearchLabs posts
- ...ial phenotypes. We have been identifying genes and mechanisms involved in the evolution of insect societies using modern genomics tools (Illumina, RNAseq, RADseq...). For example we r...
3559 days ago
Bio-Scripts
- #!/usr/bin/perl #use strict; #use warnings; #Author: Santhilal Subhash #Contact: santhilal.subhash@gu.se #RPKM for RNAseq V1.3 #USAGE for sample input provided: perl rpkm_script...
2872 days ago
- ...urch et al, 2016 study rule download_all: input: expand("rnaseq/raw_data/{sample}.fq.gz", sam...dual file specified in sample_links rule download_reads: output: "rnaseq/raw_data/{sample}.fq.gz"...
1517 days ago
- +1 more Bio-Scripts
Tags
Single Cell RNAseq data analysis tutorial !!
A major breakthrough (replaced microarrays) in the late 00’s and has been widely used since Measures the average expression level for each gene across a large population of input cells Useful for comparative transcriptomics, e.g. samples of the same tissue from different ...Tags: Single, Cell, RNAseq, analysis, tutorial
2351 days ago
- RNA-sequencing (RNA-seq) has a wide variety of applications, but no single analysis pipeline can be used in all cases. We review all of the major steps in RNA-seq data analysis, including experimental design, quality control, read alignment, quantification of gene and transcript levels, visualiza...
Tags: RNAseq, analysis, links
2351 days ago
Comments
Comment on "Which of the following programming language is best for a bioinformatics beginner?"
...new good tools made recently in python. R is good for downstream analysis like doing statistical analysis, create fancy graphs(ggplot2), work with rnaseq data (Deseq,degseq,etc), path...3532 days ago
