Results for "Ra"
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Bioinformatics Made Easy Search: Bioinformatics tools and run genomic analysis in the cloud
InsideDNA makes hundreds of bioinformatics tools immediately available to run via an easy-to-use web interface and allows an accurate search across all functions, tools and pipeline...3194 days ago
- ...(SVM) that combines 6 individual sequence based protein-protein interaction prediction methods to predict prokaryotic two-component system protein-protein interactions (PPIs). The methods imp...
2633 days ago
- ...dle big sequence data, e.g: Compare two vertebrate genomes Align billions of...y data properly. Compare DNA to proteins, with frameshifts. Compare PSSMs to se...te the likelihood of chance similarities between random sequences. Do split and...
2992 days ago
- A program to detect recombination hotspots using population genetic data. More at https://github.com/auton1/LDhot
3028 days ago
Alignment of closely related whole genomes/scaffolds
With the relative ease and low cost of current generation sequencing technologies has led to a dramatic increase in the number of sequenced genomes for species across the tree of life. This increasing vo...3032 days ago
Ensembl comparative genomics resources
The Ensembl comparative genomics resources are one such...er-base conservation scores and constrained elements are obtained. Ge...and have a consistent informatics infrastructure and data presentatio...reused for the analysis of non-vertebrate species by other projects i...3002 days ago
- MAKER is a portable and easily configurable genome annotation pipeline.Its purpose is to allow smaller eukaryotic and prokaryotic genome projects to independently annotate their gen...
3023 days ago
- RATT is software to transfer annotation from a reference (an...genome. It was first developed to transfer annotations between diff...mbly versions. However, it can also transfer annotations between stra...ica onto other Salmonella serotypes. RATT is able to transfer any ent...
3023 days ago
- CrossMap is a program for convenient conversion of genome coordinates (or annotation files) betwe...gned to liftover genome coordinates between assemblies. It’s not a program for aligning sequences to re...
3022 days ago
- Pilon is a software tool which can be used to: Automatically improve draft assemblies Find variation among strains, including large event detection Pilon requires as input a FASTA file of the ge...
3022 days ago
