List of bioinformatics open source projects/software.
...using the Microsoft 4.0 .NET Framework to help developers, res...nd visualization designed for rapid prototyping Bio4j http:/...that applies Continuous Integration tools and techniques in B...abkey.com/ platform for integrating, analyzing and sharing da...3749 days ago
List of In-silico Binding Site Prediction Tools
...purely geometric method to extract site-specific spatial patte...ry, IBIS reports physical interactions observed in experimenta...rithm for detection of structurally similar protein binding si...d ligand binding sites are extracted from PDB structure files...3736 days ago
List of generic simulation software/tools/resource with brief description and homepage !!!
...conversion under various demographic models. http://users-birc...genomic diversity under arbitrarily complex evolutionary scen...Sim A simulation tool for generating haplotype data with pre-s...ied disease and quantitative trait models. Family or unrelated...3729 days ago
Linux for bioinformatician !!!
Linux, free operating system for computers, provides several powerful admin tools and utilities which will help you to manage...nux-based computers and software. Although most bioinformatics programs can be compiled to run. If...3697 days ago
Perl one-liner for bioinformatician !!!
...re small and awesome Perl programs that fit in a single line o..., carrying out system administration tasks, updating a bunch o...15; $, = " "; print map { int(rand($max-$min))+$min } 1..$n' #...e/Sources: http://genomics-array.blogspot.in/2010/11/some-uni...3620 days ago
Next generation sequencing in R or bioconductor environment
...s packages. Documentation IRanges Overview IRanges provides the low-level in...including ShortRead, Rsamtools, rtracklayer, GenomicFeatures and B...me provides an object oriented infrastructure for interacting with...ost conserved elements and other transcription factor binding site...3617 days ago
Commercial and public next-gen-seq (NGS) software
Integrated solutions CLCbio Genomics...It contains the following programs: SWIFT — fast local a...mapping tool designed for accurate read alignments. It quickly...data. SOCS is built on an iterative variation of the Rabin-Ka...Bisulphite Sequencing of the Arabidopsis Genome Reveals DNA Me...3511 days ago
3488 days ago
Apps for Busy Bioinformatics Researchers !!!
...and end scrolling, "Chromatogram adjustments", amino acid tra...180084?mt=8 Mentha - the interactome browser: Android About:...O, and OMIM. GeneRIF gene interactions can also be queried....pplication provides gene and transcript cross reference inform...3533 days ago
3488 days ago