...to a reference database containing microbial and viral protein sequences.
By default, Kaiju uses either the available complete genomes from NCBI RefSeq or the microbial subset of th...
...tions. These annotations can be a combination of both exon predictions (e.g. Genscan) and annotations that have been experimentally verified (e.g. RefSeq). Ideally, we would like to h...
...ies, displayed as feature_type:feature_class or feature_type:controlled_vocabulary, when appropriate; derived from select feature annotations on RefSeq(s) associated with the GeneI...
...ypes of namespaces. We provide at least 40 types of IDs for more than 60 species. The 98 different namespaces supported for human include Ensembl, Refseq, Illumina, Entrezgene and Uni...