Public Databases for Bioinformatics !
...ct.org/files/ENCFF546PJU/@@download/ENCFF546PJU.bam, https://www.encodeproject.org/files/ENCFF059BEU/@@download/ENCFF059BEU.bam. Blacklisted regions were obtained from http:...1131 days ago
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YASS :: genomic similarity search tool
...ise local alignment tools for DNA sequences (FASTA, BLAST, PATTERNHUNTER, BLASTZ/LASTZ, LAST ...), YASS uses seeds to detect potential similarity regions, and then tries to extend the...2917 days ago
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Comparative genomics educational material and papers bookmarks
...ation) identified homologous synteny blocks (HSBs). Using porcine HSBs and stringent filtering criteria, 192 pig-specific evolutionary breakpoint regions (EBRs) were located. The numb...2726 days ago
Method in Comparative genomics !!
...identification of orthologs for more than 90% of genes and intergenic regions across the four species despi...s in the gene correspondence revealed recent gene family expansions in regions of rapid genomic change. We...2726 days ago
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