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Results for "Reliable"

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• • Rahul Nayak@rahul

  

  gapFinisher: A reliable gap filling pipeline for SSPACE-LongRead scaffolder output

  gapFinisher is based on the controlled use of a previously published gap filling tool FGAP and works on all standard Linux/UNIX command lines. They compare the performance of gapFinisher against two other published gap filling tools PBJelly and GMcloser. gapFinisher can fill gaps in draft genom...

  Tags: gapFinisher, reliable, gap, filling, pipeline, SSPACE, LongRead, scaffolder, NGS, Tools

  1564 days ago

• • Rahul Nayak@rahul

  

  gapFinisher: A reliable gap filling pipeline for SSPACE-LongRead scaffolder output

  gapFinisher to process SSPACE-LongRead output to fill gaps after the scaffolding. gapFinisher is based on the controlled use of a previously published gap filling tool FGAP and works on all standard Linux/UNIX command lines. https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6733440/

  Tags: gapFinisher, reliable, gap, filling, pipeline, SSPACE-LongRead, scaffolder, output

  1453 days ago

• • Surabhi Chaudhary@surabhi

  

  RAINBOWR: Reliable Association INference By Optimizing Weights with R (R package for SNP-set GWAS and multi-kernel mixed model)

  RAINBOWR(Reliable Association INference By Optimizing Weights with R) is a package to perform several types of GWAS as follows. Single-SNP GWAS with RGWAS.normal function SNP-set (or gene set) GWAS with RGWAS.multisnp function (which tests multiple SNPs at the same time) Check epistatic (SNP...

  Tags: RAINBOWR, Reliable, Association, INference, R, SNP, GWAS

  1529 days ago