1115 days ago
Assembly and diploid architecture of an individual human genome via single-molecule technologies
The research work shows that it is now possible to integrate single-molecule and high-throughput sequence data to gen...t approach reference quality. https://www.genomeweb.com/sequencing-technology/resea...3232 days ago
Resolving the complexity of the human genome using single-molecule sequencing
The human genome is arguably the most complete mammalian reference assembly yet more th...n remain poorly understood ten years after its completion. The results in this paper https://www.genomeweb.com/seq...3232 days ago
3017 days ago
PEAR: a fast and accurate Illumina Paired-End reAd mergeR
PEAR is an ultrafast, memory-efficient and highly accurate pair-end read merger. I...desktop computer. More at http://www.exelixis-lab.org/web/software/pear Paper: http://www.ncbi.nlm.nih...2963 days ago
Smash: An alignment-free method to find and visualise rearrangements between pairs of DNA sequences
Smash is a completely alignment-free method/tool to find and visualise genomic rearrangements. The detection is based...e. Nevertheless is more directed to large-scale since that the main aim of the resea...2943 days ago
RASTtk : algorithm for building custom annotation pipelines and annotating batches of genomes
...Recently, in order to make RAST a more useful research tool and to keep pace with ad...is both customizable and extensible. In this paper, we describe the RAST tool kit (...STtk), a modular version of RAST that enables researchers to build custom annotat...2942 days ago
2929 days ago
SATSUMA : Highly sensitive whole-genome synteny alignments.
Satsuma is a whole-genome synteny alignment program. It takes two genomes, computes alignments, and then keeps only t...eel free to add your own by e-mailing us) is here. If you use Satsuma in your resea...2926 days ago
RCircos: an R package for Circos 2D track plots
RCircos package provides a simple and flexible way to make Circos 2D track plots with R and could be easily integrate...graphic manipulation pipelines for presenting large-scale multi-sample genomic resea...2919 days ago