3021 days ago
3018 days ago
3005 days ago
REAPR: a universal tool for genome assembly evaluation
REAPR is a tool that evaluates the accuracy of a genome assembly using mapped paire...library in order to score each base of the assembly. http://www.sanger.ac.uk/science/tools/reapr...2963 days ago
Smash: An alignment-free method to find and visualise rearrangements between pairs of DNA sequences
Smash is a completely alignment-free method/tool to find and visualise genomic rearrangemen...rge-scale. Nevertheless is more directed to large-scale since that the main aim of the researc...2944 days ago
RASTtk : algorithm for building custom annotation pipelines and annotating batches of genomes
The RAST (Rapid Annotation using Subsystem Technology) annotation engine was built in 2008 to...unctions. Recently, in order to make RAST a more useful rese...ol kit (RASTtk), a modular version of RAST that enables researc...2943 days ago
2930 days ago
SATSUMA : Highly sensitive whole-genome synteny alignments.
Satsuma is a whole-genome synteny alignment program. It takes two genomes, computes alignme...Please feel free to add your own by e-mailing us) is here. If you use Satsuma in your researc...2927 days ago
RCircos: an R package for Circos 2D track plots
RCircos package provides a simple and flexible way to make Circos 2D track plots with R and...ing and graphic manipulation pipelines for presenting large-scale multi-sample genomic researc...2920 days ago
2887 days ago