Assembly and diploid architecture of an individual human genome via single-molecule technologies
...hroughput sequence data to generate de novo assembled genomes that approach reference quality. https://www.genomeweb.com/sequencing-technology/researchers-combine-single-molecule-seque...3219 days ago
Simons Genome Diversity Project
...technology. The sequencing reads were mapped and genotyped using a customized procedure that was optimized for population genetic analysis. The researchers eliminated bias of alleles to...1091 days ago
RASTtk : algorithm for building custom annotation pipelines and annotating batches of genomes
...of RAST that is both customizable and extensible. In this paper, we describe the RAST tool kit (RASTtk), a modular version of RAST that enables researchers to build custom annotation pi...2929 days ago
Kraken: ultrafast metagenomic sequence classification using exact alignments
...labels to metagenomic DNA sequences. Previous programs designed for this task have been relatively slow and computationally expensive, forcing researchers to use faster abundance estim...2868 days ago
GeneValidator - Identify problems with predicted genes
...tions and provide useful information extracted from analysing orthologs in BLAST databases. The results produced can be used by biocurators and researchers who need accurate gene predic...2808 days ago
2717 days ago
GenomeRing: alignment visualization based on SuperGenome coordinates
...ons, deletions or from rearrangement events. Computational tools that can visualize genome alignments in a meaningful manner are needed to help researchers gain new insights into the un...2663 days ago
2615 days ago
2589 days ago
Genome Annotation Transfer Utility (GATU)
...is sequenced, it is possible, using GATU, to automatically annotate the new strain using a previously-annotated strain of SARS CoV. This saves researchers from tedious manual annotatio...2532 days ago