Results for "Results"
Top-level pages
...t of the information stored in the genetic code, but also experimental results from various sources, patient...o sequence homology searches and links to other databases and analysis results. For example, SWISSPROT [1] c...3941 days ago
- ...Software for Genomics Artemis Artemis is a free genome viewer and annotation tool that allows visualization of sequence features and the results of analyses within the contex...
3935 days ago
Useful Publications and Websites for Deep Sequencing Data Analysis
...ng differential expression analysis with Myrna. Langmead et al, Genome Biol 11:R83, 2010 Full Text From RNA-seq reads to differential expression results. Oshlack et al, Genome Biol 1...3773 days ago
List of bioinformatics open source projects/software.
...ackage for analyzing metagenomic profiles that promotes ‘best practices’ in choosing appropriate statistical techniques and reporting results. supraHex An open-source R/...3750 days ago
List of In-silico Binding Site Prediction Tools
...ures and 210 bound structures. The comparison results show that metaPocket improves...ith the Z-score ≥ 2.5 were selected. These results can be accessed by the PDB co...sights into the mechanisms of ligand binding. Results: We present PocketPicker, an...3737 days ago
Next generation sequencing in R or bioconductor environment
...Bayesian hierarchical t-mixture model. The following sample code uses the test data set from the above BayesPeak package in order to compare the results from both methods by identify...3618 days ago
Commercial and public next-gen-seq (NGS) software
...viewable output (with Affy's Integrated Genome Browser), and produces results very similar to novocraft's.S...gh-throughput short read aligner Bowtie, and then analyzes the mapping results to identify splice junctions...3512 days ago
Apps for Busy Bioinformatics Researchers !!!
...rganisms, such as species, compute summary statistics, and present the results. Names of two taxa to be compared are entered in the search window and the results are presented on a set of sel...3535 days ago
A guide for complete R beginners !
...more in depth guide . Also R has a built-in help system (see later) Working directory This is the directory used to store your data and results. It is useful if it is also t...3355 days ago
Software packages for next gen sequence analysis
...eads. It aligns RNA-Seq reads to mammalian-sized genomes using the ultra high-throughput short read aligner Bowtie, and then analyzes the mapping results to identify splice junctions...3236 days ago
