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Results for "SAM tool"

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• • Rahul Nayak@rahul

  

  There is a new tool "Mugsy" which is a multiple whole genome aligner. http://mugsy.sourceforge.net/ #MSA #Alignments

  3702 days ago

• • Aaryan Lokwani@aaryan

  

  Squid – a simple bioinformatics grid http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1190159/?tool=pubmed

  3668 days ago

• • Jit@jit.aber

  

  Extract list of read ID from bam file: samtools view mbi.sorted.bam |perl -ne '/ID/ && print' > extractedID.sam #Extract #Ids #SAM #BAM #NGS

  3627 days ago

• • Jitendra Narayan@admin

  

  Seqtk is a fast and lightweight tool for processing sequences in the FASTA or FASTQ format. https://github.com/lh3/seqtk #FASTA #FASTAQ #NGS

  3620 days ago

• • Rahul Agarwal@raag

  

  FGAP an automated gap closing tool !! http://www.bioinfo.ufpr.br/fgap #Omics #Seq

  3601 days ago

• • Jitendra Narayan@admin

  

  A tool to edit and analyze biological pathways. http://www.pathvisio.org/ #Pathway #Analyse #Tool #Edit #Biological

  3600 days ago

• • Jit@jit.aber

  

  A web tool for exploring genome and epigenome data on a genomic scale. https://sites.google.com/site/hyperbrowserhelp/epiexplorer--tutorial-guide #Webtool #Exploring #Epigenome #Genomic

  3597 days ago

• • Rahul Agarwal@raag

  

  a tool set for pathway based data integration and visualization ! http://www.bioconductor.org/packages/release/bioc/html/pathview.html #pathway

  3595 days ago

• • Jitendra Narayan@admin

  

  The tool automatically downloads and unpacks the selected NCBI Blast databases from NCBI ftp server http://www.dnabaser.com/download/NCBI-BLAST-downloader/ #NCBI #Database #Download

  3565 days ago

• • Rahul Agarwal@raag

  

  Analysis tool for Oxford nanopore data!! https://github.com/arq5x/poretools #nanopore #omics #seq

  3563 days ago

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