Results for "SSR"
Users
Website: http://www.puneetsclassroom.in3888 days ago
Blogs
List of genome announcement, notes and reporting journals
...e, Impact factor 3.7, Short notes on newly assembled and annotated transcriptomes, genome fractions or whole genomes, and/or a library of SNP/SSR markers.Authors submit a shor...2020 days ago
Bioinformatics tools to explore SSRs in genomes !
...to explore Simple Sequence Repeats (SSRs), which are also known as mi...a web-based tool that can identify SSRs in DNA sequences. It can be...fy perfect, compound, and imperfect SSRs. SSR Locator: SSR Locat...fy perfect, compound, and imperfect SSRs. Primer3: Primer3 is a...437 days ago
Top-level pages
- Types of SSRs (simple sequence repeats), SSRs are short DNA sequences cons...peat array. The four types of SSRs are: Perfect SSR: This...ed four times. Imperfect SSR: This type of SSR contains re...example, a compound imperfect SSR with the repeat motifs "CAT"...
435 days ago
Bio-Scripts
Raku script to find SSRs in fastq file !
sub find-ssrs(Str $sequence) { my @ssrs; for 2..$sequence.chars -...at) == 0 { push @ssrs, { star...} } return @ssrs; } sub process-fastq-fil...$line-number:"; for @ssrs -> $ssr { s...124 days ago
Tags
Bioinformatics tools to explore SSRs in genomes !
There are several bioinformatics tools that can be used to explore Simple Sequence Repeats (SSRs), which are also known as microsatellites. Here are a few examples: MISA: MISA (MIcroSAtellite) is a web-based tool that can identify SSRs in DNA sequences. It can be used to analyze nucleotide s...Tags: SSR, Microsatellite, Tools, Explore, Server
437 days ago
- Types of SSRs (simple sequence repeats), SSRs are short DNA sequences consisting of a tandem repeat of a few nucleotides, typically 2-6 nucleotides in length. There are different types of SSRs based on the length and pattern of the repeated sequence, as well as the presence or...
Tags: SSR, type, classification
435 days ago
