2814 days ago
2712 days ago
orthodotter: Synteny plots (oxford grid)
...species chr-name start end species chr-name start end -toPlot <arg> : give the x and y sets and the color separated by double-dots,...2473 days ago
Meraculous: De Novo Genome Assembly with Short Paired-End Reads
...short-read assemblers. A novel memory-efficient hashing scheme is introduced. The resulting contigs are ordered and oriented using paired reads separated by ∼280 bp or ∼3.2 kb...2383 days ago
genoPlotR - plot gene and genome maps project!
...m common formats: Genbank, EMBL, blast, Mauve, and from user-generated tab files Plot several subsegments of the same segment on the same line, separated by a // Automatic or manual...1983 days ago
Rcorrector: efficient and accurate error correction for Illumina RNA-seq reads
...b.com/mourisl/Rcorrector/. Usage: perl run_rcorrector.pl [OPTIONS] OPTIONS: Required -s seq_files: comma separated files for single-end data sets -1 seq_files_left: comma separated files for the first mate in t...1563 days ago
Collection of Graph Visualization tools !
...nt but has a fundamental problem: Differences from this reference are hard to observe and describe in a coherent way. Variation and sequence are separated. https://fungidb.org...478 days ago