Tool: Gene Set Clustering based on Functional annotation (GeneSCF)
----------- Gene Set Clustering b...organisms from V1.1. Examples to download database as simple text file using GeneSCF "prepare_database" module, 1) https://www.b...ent tools is that, it performs enrichment analysis in real-time (v1.1 and above)...2885 days ago
2119 days ago
2882 days ago
Genome Assembly Tools and Software - PART1 !!
...ory saving and convenience of data inquiry, high-throughput short reads data is always initially formatted to sp...lp scientists use optical map data.Once complete, it will encapsulate...algorithm for high-throughput sequencing reads.System requirements64-b...2699 days ago
Source Code and Pseudo Code !!
An algorithm is a procedure for solving a problem in terms of the actions to be execut...endif 5. Larger example: NOTE: NEVER ANY DATA DECLARATIONS IN PSEUDOCODE...iscussed ahead) in your pseudocode. Do not include data dec...2672 days ago
Quick next generation sequencing (NGS) terms definition
fragment size: the Illumina WGS protocol generates paired-end reads from both ends of longer fragments. The...erefore the fragment size distribution can be learned empirically for each WGS data set...2535 days ago
Awesome perl frameworks, libraries and software - PART 1
...;- a tool for backing up your data using rsync (if you want to get hel...ver for the MySQL and MariaDB databases beide/Bootimg-scripts&n...utilities for Next-Generation Sequencing (NGS) data analysis masukomi/jsonpath-perl&n...Framework for High Throughput Sequencing analysis gbarr/perl-libnet - per...2502 days ago
2502 days ago
Phylogenetic & Molecular Genetics Terms and Definitions
...m, resulting from a cladistic analysis, which depicts a hypothet...and (by reference to sequence data banks) for discovery of identitie...s. ingroup -- In a cladistic analysis, the set of taxa which are hy...haracters used in a cladistic analysis, either original or derived....2475 days ago
Alignment-free sequence comparison tools available for next-generation sequencing data analysis
...e quantification from RNA-seq data (uses pseudoalignment for rapid det...ference sequences and RNA-seq data (k-mer based) Software (C++) http...ction Lighter Correction of sequencing errors in raw, whole genome sequencing reads (k-mer based) So...2384 days ago