Results for "Sequencing Technology"
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FQC is software that facilitates quality control of FASTQ files by carrying out a QC protocol using FastQC, parsing r...etrics into an interactive dashboard designed to richly summarize individual sequencing...1276 days ago
- Microbiome analysis using a single application MEGAN6 is a comprehensive toolbox for interactively analyzing microbi...you to work with hundreds of samples containing hundreds of millions of sequencing...
2845 days ago
- Genome STRiP (Genome STRucture In Populations) is a suite of tools for discovering and genotyping structural variations using sequencing data. The methods are designe...heterogeneous data sets, including variations in sequencing...
2802 days ago
- Recent technological progress has greatly facilitated de novo genome sequencing. However, de novo assemblies consist in many pieces of contiguous sequence (contigs) arranged...
2815 days ago
- Redundans pipeline assists an assembly of heterozygous genomes.Program takes as input...embled contigs, paired-end and/or mate pairs sequencing libraries and returns&nb...to-medium size genomes flexible toward many sequencing...
2807 days ago
OPERA : Optimal Paired-End Read Assembler
OPERA (Optimal Paired-End Read Assembler) is a sequence assembly program (http://en.wikipedia.org/wiki/Sequence_assem...ERA-long-read that enables scaffolding with long-reads from third-generation sequencing...2799 days ago
- These tutorials are written for hundreds of bioinformaticians trying to cope...ith large volume of next-generation sequencing (NGS) data. NGS technologies...ht a dramatic shift in the world of sequencing. Merely five years back, geno...s government agencies. The tasks of sequencing...
2802 days ago
GAGE : Genome Assembly Gold-standard Evaluation
GAGE is an evaluation of the very latest large-scale genome assembly algorithms. We have organized this "bake-off" as...t of genome assembly software in a rapidly changing field of next-generation sequencing...2801 days ago
- Development of cancer is driven by somatic alterations, including numerical and structural chromosomal aberrations. C...array-Comparative Genomic Hybridization (CGH) or by (low-pass) whole genome sequencing...
2157 days ago
- The MIRO (the miRNA omics) pipeline is a flexible and powerful tool for the analysis of mi...erall short RNA) expression using short-read deep sequencing data. In its present implemen...the analysis of reads generated with the Illumina sequencing...
2773 days ago
