Comment on "Which of the following programming language is best for a bioinformatics beginner?"
I would recommend python and lower level language C because of easier syntax and simple oops approach. Moreover, I do a lot of boinformatics programming, but I don’t use any of the &ldqu...3539 days ago
Comment on "Which of the following programming language is best for a bioinformatics beginner?"
...recommend python because of easier syntax and simple oops approach. Now python can...work with rnaseq data (Deseq,degseq,etc), pathway analysis, etc, however R itself...is also getting popular these days because of simple programming style. But som...3540 days ago
Comment on "Which of the following programming language is best for a bioinformatics beginner?"
...times it is not a clear language. Probably there is as many ways to use Perl as programers are, so it can be very simple (just scripting like the m...object programming using Moose). Some Bioperl modules not always works.3540 days ago
Comment on "Most Commonly used Awk by Bioinformatician"
To deal with simple CSV: awk -F, '{print $1,$2}'3635 days ago
Comment on "Five unique traits of effective computational biologist"
Corpas M, Fatumo S, Schneider R. (2012) How not to be a bioinformatician.&...tenko A, Taylor J, Hovig E (2013) Ten Simple Rules for Reproducible Comput...1003285. [link] Bourne PE (2011) Ten Simple Rules for Getting Ahead as a...er PP, Manske M, Bateman A (2010) Ten Sim...3838 days ago
Comment on "Most Commonly used Awk by Bioinformatician"
This MIT wiki page demonstration shows how to perform some basic bioinformatics tasks using simple UNIX commands. http://rous.mit.edu/index.php/Unix_commands_applied_to_bioinformatics3917 days ago